Skip to content

Execute notebooks against PostgreSQL (validates logging + database_prefix changes) #143

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
MilagrosMarin merged 1 commit into from
Jan 27, 2026
Merged

Execute notebooks against PostgreSQL (validates logging + database_prefix changes) #143

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
94 changes: 47 additions & 47 deletions src/how-to/master-part.ipynb
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -16,18 +16,18 @@
"id": "cell-setup",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:39.999867Z",
"iopub.status.busy": "2026-01-24T03:26:39.999756Z",
"iopub.status.idle": "2026-01-24T03:26:41.338952Z",
"shell.execute_reply": "2026-01-24T03:26:41.338661Z"
"iopub.execute_input": "2026-01-27T21:28:06.445406Z",
"iopub.status.busy": "2026-01-27T21:28:06.445175Z",
"iopub.status.idle": "2026-01-27T21:28:07.940266Z",
"shell.execute_reply": "2026-01-27T21:28:07.939862Z"
}
},
"outputs": [
{
"name": "stderr",
"name": "stdout",
"output_type": "stream",
"text": [
"[2026-01-23 21:26:41,324][INFO]: DataJoint 2.1.0a7 connected to postgres@127.0.0.1:5432\n"
"[2026-01-27 15:28:07] DataJoint 2.1.0a9 connected to postgres@127.0.0.1:5432\n"
]
}
],
Expand Down Expand Up @@ -84,10 +84,10 @@
"id": "cell-define",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:41.340879Z",
"iopub.status.busy": "2026-01-24T03:26:41.340663Z",
"iopub.status.idle": "2026-01-24T03:26:41.874634Z",
"shell.execute_reply": "2026-01-24T03:26:41.873994Z"
"iopub.execute_input": "2026-01-27T21:28:07.942177Z",
"iopub.status.busy": "2026-01-27T21:28:07.941941Z",
"iopub.status.idle": "2026-01-27T21:28:08.549507Z",
"shell.execute_reply": "2026-01-27T21:28:08.549112Z"
}
},
"outputs": [
Expand Down Expand Up @@ -156,7 +156,7 @@
"</svg>"
],
"text/plain": [
"<datajoint.diagram.Diagram at 0x1a4908980>"
"<datajoint.diagram.Diagram at 0x117083860>"
]
},
"execution_count": 2,
Expand Down Expand Up @@ -225,10 +225,10 @@
"id": "cell-insert",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:41.876541Z",
"iopub.status.busy": "2026-01-24T03:26:41.876431Z",
"iopub.status.idle": "2026-01-24T03:26:41.891465Z",
"shell.execute_reply": "2026-01-24T03:26:41.891161Z"
"iopub.execute_input": "2026-01-27T21:28:08.551343Z",
"iopub.status.busy": "2026-01-27T21:28:08.551183Z",
"iopub.status.idle": "2026-01-27T21:28:08.569192Z",
"shell.execute_reply": "2026-01-27T21:28:08.568899Z"
}
},
"outputs": [
Expand Down Expand Up @@ -422,10 +422,10 @@
"id": "cell-query",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:41.893186Z",
"iopub.status.busy": "2026-01-24T03:26:41.893068Z",
"iopub.status.idle": "2026-01-24T03:26:41.899532Z",
"shell.execute_reply": "2026-01-24T03:26:41.899196Z"
"iopub.execute_input": "2026-01-27T21:28:08.571016Z",
"iopub.status.busy": "2026-01-27T21:28:08.570728Z",
"iopub.status.idle": "2026-01-27T21:28:08.577526Z",
"shell.execute_reply": "2026-01-27T21:28:08.577267Z"
}
},
"outputs": [
Expand Down Expand Up @@ -583,10 +583,10 @@
"id": "cell-join",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:41.901021Z",
"iopub.status.busy": "2026-01-24T03:26:41.900905Z",
"iopub.status.idle": "2026-01-24T03:26:41.907311Z",
"shell.execute_reply": "2026-01-24T03:26:41.907011Z"
"iopub.execute_input": "2026-01-27T21:28:08.578739Z",
"iopub.status.busy": "2026-01-27T21:28:08.578645Z",
"iopub.status.idle": "2026-01-27T21:28:08.586986Z",
"shell.execute_reply": "2026-01-27T21:28:08.586754Z"
}
},
"outputs": [
Expand Down Expand Up @@ -750,10 +750,10 @@
"id": "cell-aggr",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:41.908842Z",
"iopub.status.busy": "2026-01-24T03:26:41.908711Z",
"iopub.status.idle": "2026-01-24T03:26:41.916597Z",
"shell.execute_reply": "2026-01-24T03:26:41.916314Z"
"iopub.execute_input": "2026-01-27T21:28:08.588208Z",
"iopub.status.busy": "2026-01-27T21:28:08.588130Z",
"iopub.status.idle": "2026-01-27T21:28:08.595820Z",
"shell.execute_reply": "2026-01-27T21:28:08.595587Z"
}
},
"outputs": [
Expand Down Expand Up @@ -905,10 +905,10 @@
"id": "cell-computed",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:41.917938Z",
"iopub.status.busy": "2026-01-24T03:26:41.917847Z",
"iopub.status.idle": "2026-01-24T03:26:41.967094Z",
"shell.execute_reply": "2026-01-24T03:26:41.966816Z"
"iopub.execute_input": "2026-01-27T21:28:08.597104Z",
"iopub.status.busy": "2026-01-27T21:28:08.597022Z",
"iopub.status.idle": "2026-01-27T21:28:08.676618Z",
"shell.execute_reply": "2026-01-27T21:28:08.676350Z"
}
},
"outputs": [
Expand Down Expand Up @@ -1097,39 +1097,39 @@
"id": "cell-delete",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:41.968625Z",
"iopub.status.busy": "2026-01-24T03:26:41.968508Z",
"iopub.status.idle": "2026-01-24T03:26:42.002032Z",
"shell.execute_reply": "2026-01-24T03:26:42.001760Z"
"iopub.execute_input": "2026-01-27T21:28:08.678044Z",
"iopub.status.busy": "2026-01-27T21:28:08.677958Z",
"iopub.status.idle": "2026-01-27T21:28:08.713285Z",
"shell.execute_reply": "2026-01-27T21:28:08.712955Z"
}
},
"outputs": [
{
"name": "stderr",
"name": "stdout",
"output_type": "stream",
"text": [
"[2026-01-23 21:26:41,987][INFO]: Deleting 3 rows from \"howto_masterpart\".\"__session_analysis__trial_score\"\n"
"[2026-01-27 15:28:08] Deleting 3 rows from \"howto_masterpart\".\"__session_analysis__trial_score\"\n"
]
},
{
"name": "stderr",
"name": "stdout",
"output_type": "stream",
"text": [
"[2026-01-23 21:26:41,989][INFO]: Deleting 3 rows from \"howto_masterpart\".\"session__trial\"\n"
"[2026-01-27 15:28:08] Deleting 3 rows from \"howto_masterpart\".\"session__trial\"\n"
]
},
{
"name": "stderr",
"name": "stdout",
"output_type": "stream",
"text": [
"[2026-01-23 21:26:41,997][INFO]: Deleting 1 rows from \"howto_masterpart\".\"__session_analysis\"\n"
"[2026-01-27 15:28:08] Deleting 1 rows from \"howto_masterpart\".\"__session_analysis\"\n"
]
},
{
"name": "stderr",
"name": "stdout",
"output_type": "stream",
"text": [
"[2026-01-23 21:26:41,999][INFO]: Deleting 1 rows from \"howto_masterpart\".\"session\"\n"
"[2026-01-27 15:28:08] Deleting 1 rows from \"howto_masterpart\".\"session\"\n"
]
},
{
Expand Down Expand Up @@ -1179,10 +1179,10 @@
"id": "cell-cleanup",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-24T03:26:42.003563Z",
"iopub.status.busy": "2026-01-24T03:26:42.003438Z",
"iopub.status.idle": "2026-01-24T03:26:42.007731Z",
"shell.execute_reply": "2026-01-24T03:26:42.007418Z"
"iopub.execute_input": "2026-01-27T21:28:08.714736Z",
"iopub.status.busy": "2026-01-27T21:28:08.714648Z",
"iopub.status.idle": "2026-01-27T21:28:08.719059Z",
"shell.execute_reply": "2026-01-27T21:28:08.718801Z"
}
},
"outputs": [],
Expand Down
Loading